PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010934904.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 730aa    MW: 81170.5 Da    PI: 4.6976
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010934904.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.28.2e-5091421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp GfrFhPtdeelv+ yLk+k++g+  +  e+i+e+di+k+ePwdLp k  +++++ ew+fF+++d+kya+g+r+nrat++gyWkatg+d+ + 
  XP_010934904.1   9 LPIGFRFHPTDEELVNVYLKRKISGRIRNDMEIIPEIDILKCEPWDLPdKsIIRSDDPEWFFFAPKDRKYANGNRSNRATEAGYWKATGRDRLIR 103
                     699***********************9877799**************96446667778************************************* PP

             NAM  94 sk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     sk    +++l+g+kktLvf++grapkg +t+W++heyr 
  XP_010934904.1 104 SKaapgRQNLIGMKKTLVFHRGRAPKGIRTRWIIHEYRT 142
                     *999988899***************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-557163IPR003441NAC domain
PROSITE profilePS5100556.2729163IPR003441NAC domain
PfamPF023652.3E-2510141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    Send to blast
MMTISPGSLP IGFRFHPTDE ELVNVYLKRK ISGRIRNDME IIPEIDILKC EPWDLPDKSI  60
IRSDDPEWFF FAPKDRKYAN GNRSNRATEA GYWKATGRDR LIRSKAAPGR QNLIGMKKTL  120
VFHRGRAPKG IRTRWIIHEY RTTEREFESG DQGGYVLYRL FKKPEEKGSN SKADEMEKSG  180
FSPTPTKSSP DGTLHEEDSM EEISTPVNQK SPESGLQEEP QSLPDSVEQQ PTVIKRWLTD  240
NIHCSATCSV EPDERSCNVA ADNHDAKAGM HDVSTQYHGP HHQQIDSNGF PNFSSPMLPC  300
TDDQESPMED VDDADRDSFH EFLDAVLGNP DEYSPRASDA QKNSVAESVP RHGIWDSASF  360
RDSGTSSDID TEAGLPQEHV SLEASEWSEE PSFLLNELLQ MNSSYGYPET EPHLSAPYEN  420
ASLLPYDSTG PDVCSVDPAS ESLQYLFDSM EASNNQKNIA NNGDGLEVTG IEFRPHQLQH  480
PSDSKNISAQ QSTITSRFRL QGPVQNVSFA LAGSESSSSG DDHEDKEAMR KALQDLCDST  540
EESLTQKDTP SNEDGFEGTG IKIRTRKAHP PSLNKLSSKR GRVFGRIRLQ ASLEVGSFSA  600
IAGESSSSKD DQVDRESTTE SLQAGEHVDD NLAEFREISK PALLDKLEQL SIHDDATHSS  660
ELYQESKPLL RLRTKGTYDD ANVLKDPPSH PGISGTGSVV AYVVRLVLAV ILLLMCFGIW  720
RCINSQYVPI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B1e-41816316165NAC domain-containing protein 19
4dul_A1e-41816316165NAC domain-containing protein 19
1ut7_B1e-41816316165NO APICAL MERISTEM PROTEIN
1ut7_A1e-41816316165NO APICAL MERISTEM PROTEIN
1ut4_B1e-41816316165NO APICAL MERISTEM PROTEIN
1ut4_A1e-41816316165NO APICAL MERISTEM PROTEIN
3swp_D1e-41816319168NAC domain-containing protein 19
3swp_C1e-41816319168NAC domain-containing protein 19
3swp_B1e-41816319168NAC domain-containing protein 19
3swp_A1e-41816319168NAC domain-containing protein 19
3swm_D1e-41816319168NAC domain-containing protein 19
3swm_C1e-41816319168NAC domain-containing protein 19
3swm_B1e-41816319168NAC domain-containing protein 19
3swm_A1e-41816319168NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010934904.10.0PREDICTED: uncharacterized protein LOC105054944 isoform X1
TrEMBLM0U6680.0M0U668_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP04060_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51723859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-70NAC transcription factor-like 9